Parallel evolutionary pathways to antibiotic resistance selected by biocide exposure

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• Development of robust analytical pipelines for the analysis of microbial community data from clinical samples

  Loman, N.

  Medical Research Council

  1/09/12 → 31/08/15

  Project: Research Councils

  • Bacterial Genomes 100%
  • Nanopores 90%
  • Nanopore Sequencing 82%
  • Genome 80%
  • Whole Genome Sequencing 80%

• Evolution of Multidrug Resistance in Salmonella Enterica Serovar Typhimurium as a Result of Biocide Exposure

  Webber, M., Pallen, M. & Piddock, L.

  Biotechnology & Biological Sciences Research Council

  13/07/09 → 12/07/12

  Project: Research Councils

  • Anti-Bacterial Agents 100%
  • Salmonella enterica 89%
  • Disinfectants 84%
  • Serogroup 66%
  • Quinolones 61%

• xBASE: A bioinformatics resource for the AgriFood Bacteriology Community

  Pallen, M. & Stekel, D.

  Biotechnology & Biological Sciences Research Council

  1/02/07 → 31/01/12

  Project: Research Councils

  • Escherichia coli O104 100%
  • Bacterial Genomes 93%
  • Genome 62%
  • Disease Outbreaks 50%
  • Shiga-Toxigenic Escherichia coli 50%