Immune infiltration and prognostic and diagnostic use of LGALS4 in colon adenocarcinoma and bladder urothelial carcinoma

Animesh Acharjee, Prasoon Agarwal, Katrina Nash, Subia Bano, Taufiq Rahman, Georgios Gkoutos

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Abstract

Colon adenocarcinoma (COAD) is a common tumor of the gastrointestinal tract with a high mortality rate. Current research has identified many genes associated with immune infiltration that play a vital role in the development of COAD. In this study, we analyzed the prognostic and diagnostic features of such immune-related genes in the context of colonic adenocarcinoma (COAD). We analysed 17 overlapping gene expression profiles of COAD and healthy samples obtained from TCGA-COAD and public single-cell sequencing resources, to identify potential therapeutic COAD targets. We evaluated the abundance of immune infiltration with those genes using the TIMER (Tumor Immune Estimation Resource) deconvolution method. Subsequently, we developed predictive and survival models to assess the prognostic value of these genes. The LGALS4 (Galectin-4) gene was found to be significantly (P<0.05) downregulated in COAD and bladder urothelial carcinoma (BLCA) compared to healthy samples. We identified LGALS4 as a prognostic and diagnostic marker for multiple cancer types, including COAD and BLCA. Our analysis reveals a series of novel candidate drug targets, as well as candidate molecular markers, that may explain the pathogenesis of COAD and BLCA. LGALS4 gene is associated with multiple cancer types and is a possible prognostic, as well as diagnostic, marker of COAD and BLCA.
Original languageEnglish
Pages (from-to)11353-11363
Number of pages11
JournalAmerican Journal of Translational Research
Volume13
Issue number10
Early online date15 Oct 2021
Publication statusPublished - 30 Oct 2021

Bibliographical note

Publisher Copyright:
© 2021 E-Century Publishing Corporation. All rights reserved.

Keywords

  • Biomarker
  • BLCA
  • Immune infiltration
  • LGALS4
  • Omics integration
  • Translational research

ASJC Scopus subject areas

  • Molecular Medicine
  • Cancer Research
  • Clinical Biochemistry

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