Browse Publications

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    "Omics" approaches in the context of environmental toxicology

    Joseph Shaw, Mark Viant, 1 Jan 2007, Genomic Approaches for Cross-Species Extrapolation in Toxicology. CRC Press, p. 1-31 31 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

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    'It was nothing that you would think was anything': qualitative analysis of appraisal and help seeking preceding brain cancer diagnosis

    Colin Watts, 22 Mar 2019, In: PLoS ONE. 14, 3, 22 p., e0213599.

    Research output: Contribution to journalArticlepeer-review

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    2019 update of the EULAR recommendations for the management of systemic lupus erythematosus

    Caroline Gordon, 29 Mar 2019, In: Annals of the Rheumatic Diseases. 78, 6, p. 736-745 10 p.

    Research output: Contribution to journalReview articlepeer-review

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    3D microstructure design of lithium-ion battery electrodes assisted by X-ray nano-computed tomography and modelling

    Emma Kendrick, 29 Apr 2020, In: Nature Communications. 11, 1, 13 p., 2079.

    Research output: Contribution to journalArticlepeer-review

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    A Novel TGFβ Modulator that Uncouples R-Smad/I-Smad-Mediated Negative Feedback from R-Smad/Ligand-Driven Positive Feedback

    Rui Monteiro, 9 Feb 2015, In: PLoS Biology. 13, 2, e1002051.

    Research output: Contribution to journalArticlepeer-review

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    A Toll-receptor map underlies structural brain plasticity

    Guiyi Li, Jill Wentzell, Niki Anthoney & Alicia Hidalgo, 18 Feb 2020, In: eLife. 9, p. 1-32 32 p., e52743.

    Research output: Contribution to journalArticlepeer-review

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    A descriptive cross sectional study comparing barriers and determinants of physical activity of Sri Lankan middle aged and older adults

    Afroditi Stathi, 12 May 2020, In: PLoS ONE. 15, 5, e0232956.

    Research output: Contribution to journalReview articlepeer-review

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    A pair-wise relationships model of hematopoietic fate determination

    Geoff Brown, Bob Michell, 1 Dec 2009, Cell Determination during Hematopoiesis. Nova Science Publishers Inc, p. 262-283 22 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

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    A portable image-based cytometer for rapid malaria detection and quantification

    Jinming Duan, 8 Jun 2017, In: PLoS ONE. 12, 6, 18 p., e0179161.

    Research output: Contribution to journalArticlepeer-review

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    A reference-grade wild soybean genome

    & 10 others, , Christine Foyer, 14 Mar 2019, In: Nature Communications. 10, 1, 12 p., 1216.

    Research output: Contribution to journalArticlepeer-review

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    A roadmap for gene functional characterisation in crops with large genomes: lessons from polyploid wheat

    Philippa Borrill & 7 others, , 24 Mar 2020, In: eLife. 9, 30 p., e55646.

    Research output: Contribution to journalReview articlepeer-review

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    A season for all things: phenological imprints in Wikipedia usage and their relevance to conservation

    Tom Matthews, 5 Mar 2019, In: PLoS Biology. 17, 3, e3000146.

    Research output: Contribution to journalArticlepeer-review

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    Aberrant expression of CD19 in AML with t(8;21) involves a poised chromatin structure and PAX5

    Peter Cockerill, Maarten Hoogenkamp, Conny Bonifer, 20 May 2010, In: Oncogene. 29, 20, p. 2927-37 11 p.

    Research output: Contribution to journalArticle

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    Activation of the canonical bone morphogenetic protein (BMP) pathway during lung morphogenesis and adult lung tissue repair

    Rui Monteiro, 20 Aug 2012, In: PLoS ONE. 7, 8, e41460.

    Research output: Contribution to journalArticlepeer-review

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    Advances in Biopharmaceutical Agents and Growth Factors for Wound Healing and Scarring

    Tony Metcalfe, 2016, Skin Tissue Engineering and Regenerative Medicine. Albanna, M. Z. & Holmes, J. H. (eds.). Elsevier, p. 337-355 19 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

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    Afghanistan's ethnic groups share a y-chromosomal heritage structured by historical events

    28 Mar 2012, In: PLoS ONE. 7, 3, e34288.

    Research output: Contribution to journalArticlepeer-review

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    Agonist-induced membrane nanodomain clustering drives GLP-1 receptor responses in pancreatic beta cells

    Zsombor Koszegi, Davide Calebiro, 20 Aug 2019, In: PLoS Biology. 17, 8, p. e3000097

    Research output: Contribution to journalArticlepeer-review

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    Airway response to respiratory syncytial virus has incidental antibacterial effects

    Christopher Green, 17 May 2019, In: Nature Communications. 10, 11 p., 2218.

    Research output: Contribution to journalArticlepeer-review

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    Alpha/beta power decreases track the fidelity of stimulus-specific information

    Benjamin Griffiths, Stephen Mayhew, Ian Charest, Maria Wimber & Simon Hanslmayr, 29 Nov 2019, In: eLife. 8, e49562.

    Research output: Contribution to journalArticlepeer-review

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    An extended set of PRDM1/BLIMP1 target genes links binding motif type to dynamic repression

    Conny Bonifer, 1 Sep 2010, In: Nucleic Acids Research. 38, 16, p. 5336-50 15 p.

    Research output: Contribution to journalArticle

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    Analyzing histone modification using crosslinked chromatin treated with micrococcal nuclease

    Conny Bonifer, 1 Jan 2006, In: Methods in molecular biology. 325, p. 315-25 11 p.

    Research output: Contribution to journalArticle

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    Analyzing the effects of stromal cells on the recruitment of leukocytes from flow

    Ed Rainger, Gerard Nash & Helen McGettrick, 7 Jan 2015, In: Journal of Visualized Experiments. 95, e52480.

    Research output: Contribution to journalArticlepeer-review

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    Aneuploidy as a cause of impaired chromatin silencing and mating-type specification in budding yeast

    Hung-Ji Tsai, 22 Sep 2017, In: eLife. 6, 23 p., e27991.

    Research output: Contribution to journalArticlepeer-review

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    Apolipoprotein A5 polymorphism and triglycerides in ischemic cerebrovascular disease

    G Neil Thomas, 1 Apr 2015, Biochemistry and Molecular Biology: The Complexity of Human Traits and Diseases. Nova Science Publishers, Inc., p. 1-10 10 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

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    Atomic-resolution imaging of surface and core melting in individual size-selected Au nanoclusters on carbon

    13 Jun 2019, In: Nature Communications. 10, 1, 8 p., 2583.

    Research output: Contribution to journalArticlepeer-review

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    Automatic detection of meddies through texture analysis of sea surface temperature maps

    Marco Castellani, 2005, Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). Vol. 3808 LNCS. p. 359-370 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 3808 LNCS).

    Research output: Chapter in Book/Report/Conference proceedingConference contribution

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    Avian community responses to variability in river hydrology

    David Hannah, Jim Reynolds, Jon Sadler & (ed.), 10 Dec 2013, In: PLoS ONE. 8, 12, e83221.

    Research output: Contribution to journalArticlepeer-review

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    BMP signalling differentially regulates distinct haematopoietic stem cell types

    Rui Monteiro, 18 Aug 2015, In: Nature Communications. 6, 8040.

    Research output: Contribution to journalArticlepeer-review

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    Basic Fibroblast Growth Factor Is an Autocrine Factor for Rat Thyroid Follicular Cells

    Michael Sheppard, 1 Jan 1991, In: Annals of the New York Academy of Sciences. 638, 1, p. 453-455 3 p.

    Research output: Contribution to journalArticlepeer-review

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    Biliary Disease: From Science to Clinic

    Gideon Hirschfield (ed.), (ed.) & Evaggelia Liaskou (ed.), 6 Mar 2017, Springer. 264 p.

    Research output: Book/ReportBook

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    Bioinformatic approaches to processing and annotation of high-resolution mass spectrometry data

    Ralf Weber & Mark Viant, 1 Jan 2010, Methodologies for Metabolomics: Experimental Strategies and Techniques. Cambridge University Press, p. 159-173 15 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

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    Biosynthesis of histone messenger RNA employs a specific 3’ end endonuclease

    Pawel Grzechnik, 3 Dec 2018, In: eLife. 7, 26 p., e39865.

    Research output: Contribution to journalArticlepeer-review

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    Blood stem cell-forming haemogenic endothelium in zebrafish derives from arterial endothelium

    Rui Monteiro, 8 Aug 2019, In: Nature Communications. 10, 1, 14 p., 3577.

    Research output: Contribution to journalArticlepeer-review

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    Bodily Illusions in Young Children: Developmental Change in Visual and Proprioceptive Contributions to Perceived Hand Position

    Andrew Bremner, 30 Jan 2013, In: PLoS ONE. 8, 1, e51887.

    Research output: Contribution to journalArticlepeer-review

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    C/EBP beta induces chromatin opening at a cell-type-specific enhancer

    Conny Bonifer, 1 Mar 2008, In: Molecular and Cellular Biology. 28, 6, p. 2102-2112 11 p.

    Research output: Contribution to journalArticle

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    Cellular stress associated with aneuploidy

    Hung-Ji Tsai, 26 Feb 2018, In: Developmental Cell. 44, 4, p. 420-431 12 p.

    Research output: Contribution to journalReview articlepeer-review

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    Cervical cancer in the North Western Region

    1994, Manchester: Centre for Cancer Epidemiology, Manchester.

    Research output: Book/ReportOther report

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    Characterization of RNA aptamers that disrupt the RUNX1-CBFbeta/DNA complex

    Conny Bonifer, 1 Nov 2009, In: Nucleic Acids Research. 37, 20, p. 6818-30 13 p.

    Research output: Contribution to journalArticle

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    Chromatin regulation by RUNX1

    Monika Lichtinger, Maarten Hoogenkamp & Conny Bonifer, 15 Apr 2010, In: Blood Cells, Molecules & Diseases. 44, 4, p. 287-90 4 p.

    Research output: Contribution to journalArticle

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    Circuit implementation of a four-dimensional topological insulator

    Hannah M Price, 12 May 2020, In: Nature Communications. 11, 1, 7 p., 2356.

    Research output: Contribution to journalArticlepeer-review

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    Competition and constraint drove Cope's rule in the evolution of giant flying reptiles

    Richard Butler, 2 Apr 2014, In: Nature Communications. 5, 4567.

    Research output: Contribution to journalArticlepeer-review

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    Computational approaches to support comparative analysis of multiparametric tests: Modelling versus Training

    3 Sep 2020, In: PLoS ONE. 15, 9 September, e0238593.

    Research output: Contribution to journalArticlepeer-review

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    Conditioned sounds enhance visual processing

    Uta Noppeney, 5 Sep 2014, In: PLoS ONE. 9, 9, e106860.

    Research output: Contribution to journalArticlepeer-review

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    Conscious perception of natural images is constrained by category-related visual features

    Ilja Sligte, Sara Assecondi, Kim Shapiro & Ian Charest, 11 Sep 2019, In: Nature Communications. 10, 1, 9 p., 4106.

    Research output: Contribution to journalArticlepeer-review

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    Conservation Planning for Crop Wild Relative Diversity

    Nigel Maxted, Shelagh Kell, Joana Magos Brehm, 4 Sep 2015, Crop Wild Relatives and Climate Change. Wiley-Blackwell, p. 88-107 20 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

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    Controlling the texture of spreads

    Edward Pelan, 3 Jul 2003, Semi-Solid Foods. Elsevier, Vol. 1. p. 350-372 23 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

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    Cortical hierarchies perform Bayesian causal inference in multisensory perception

    Uta Noppeney, 24 Feb 2015, In: PLoS Biology. 13, 2, e1002073.

    Research output: Contribution to journalArticlepeer-review

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    Crop Wild Relatives and Climate Change

    Nigel Maxted, 4 Sep 2015, Wiley-Blackwell. 368 p.

    Research output: Book/ReportBook

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    Crowdsourcing for cognitive science - the utility of smartphones

    Fiona McNab, 15 Jul 2014, In: PLoS ONE. 9, 7, e100662.

    Research output: Contribution to journalArticlepeer-review

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    Current challenges in the development of new treatments for lupus

    Caroline Gordon, 12 Jan 2019, In: Annals of the Rheumatic Diseases. 78, 6, p. 729-735 7 p.

    Research output: Contribution to journalArticlepeer-review

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    Cyclooxigenase-2 is upregulated and localized to macrophages in the intestine of min mice

    Conny Bonifer, Mar 1999, In: British Journal of Cancer. 79, 9/10, p. 1399-1405

    Research output: Contribution to journalArticlepeer-review

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    Cytokine and proinflammatory gene expression in classical Hodgkin lymphoma: Its more than NF-κB!

    Pierre Cauchy, Conny Bonifer, Mar 2015, In: Cytokine. 72, 1, p. 115–117

    Research output: Contribution to journalArticle

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    DNA damage emergency: cellular garbage disposal to the rescue?

    Jo Morris, 18 Mar 2013, In: Oncogene. 33, p. 805-813

    Research output: Contribution to journalReview articlepeer-review

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    DeepCDpred: inter-residue distance and contact prediction for improved prediction of protein structure

    Chris Thomas, Sam Butterworth & Peter Winn, 8 Jan 2019, In: PLoS ONE. 14, 1, e0205214.

    Research output: Contribution to journalArticlepeer-review

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    Defining host–pathogen interactions employing an artificial intelligence workflow

    Jason Mercer, 12 Feb 2019, In: eLife. 8, e40560.

    Research output: Contribution to journalArticlepeer-review

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    Derepression of an endogenous long terminal repeat activates the CSF1R proto-oncogene in human lymphoma

    & 5 others, Peter Cockerill, Conny Bonifer, 1 May 2010, In: Nature Medicine. 16, 5, p. 571-9, 1p following 579

    Research output: Contribution to journalArticlepeer-review

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    Detecting chaos with neural networks

    Chris Miall, 1 Jan 1990, In: Proceedings of the Royal Society B: Biological Sciences. 242, 1304, p. 82-86 5 p.

    Research output: Contribution to journalArticlepeer-review

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    Developmental changes in the differentiation capacity of hematopoietic stem cells

    Conny Bonifer, 1 May 1998, In: Immunology Today. 19, 5, p. 236-241

    Research output: Contribution to journalArticlepeer-review

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    Developmental regulation of eukaryotic gene loci: which cis-regulatory information is required?

    Conny Bonifer, 1 Jul 2000, In: Trends in Genetics. 16, 7, p. 310-315

    Research output: Contribution to journalArticlepeer-review

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    Developmental-stage-dependent transcriptional response to leukaemic oncogene expression

    Salam Assi, Jane Gilmour & Conny Bonifer, 28 May 2015, In: Nature Communications. 6, 7203.

    Research output: Contribution to journalArticlepeer-review

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    Different macrophage populations develop from embryonic/fetal and adult hematopoietic tissues

    Conny Bonifer, 1997, In: Experimental Hematology. 25, 5, p. 432-444

    Research output: Contribution to journalArticlepeer-review

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    Different temporal windows for CB1 receptor involvement in contextual fear memory destabilisation in the amygdala and hippocampus

    Jonathan Lee, 15 Jan 2019, In: PLoS ONE. 14, 1, e0205781.

    Research output: Contribution to journalArticlepeer-review

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    Dimensional crossover of the dephasing time in disordered mesoscopic rings: From diffusive through ergodic to 0D behavior

    Igor Lerner, 1 Jan 2010, Perspectives of Mesoscopic Physics: Dedicated to Yoseph Imry's 70th Birthday. World Scientific, p. 371-396 26 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

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    Discrete and continuum multiscale behaviour in bacterial communication

    Sara Jabbari, 2013, Multiscale Computer Modelling in Biomechanics and Biomedical Engineering.. Gefen, A. (ed.). Springer, Vol. 14. p. 299 320 p. (Studies in Mechanobiology, Tissue Engineering and Biomaterials).

    Research output: Chapter in Book/Report/Conference proceedingChapter

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    Do we really understand how faecal microbiota transplantation works?

    Mohammed Nabil Quraishi, Alan McNally & Willem van Schaik, 1 Apr 2019, In: EBioMedicine. 42, p. 39 1 p.

    Research output: Contribution to journalLetter

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