Mobilization of Pack-CACTA transposons in Arabidopsis suggests the mechanism of gene shuffling

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Mobilization of Pack-CACTA transposons in Arabidopsis suggests the mechanism of gene shuffling. / Catoni, Marco; Jonesman, Thomas; Cerruti, Elisa; Paszkowski, Jerzy.

In: Nucleic Acids Research, Vol. 47, No. 3, 20.02.2019, p. 1311–1320.

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Catoni, Marco ; Jonesman, Thomas ; Cerruti, Elisa ; Paszkowski, Jerzy. / Mobilization of Pack-CACTA transposons in Arabidopsis suggests the mechanism of gene shuffling. In: Nucleic Acids Research. 2019 ; Vol. 47, No. 3. pp. 1311–1320.

Bibtex

@article{ee891f9a3f70418db33934af87a2885d,
title = "Mobilization of Pack-CACTA transposons in Arabidopsis suggests the mechanism of gene shuffling",
abstract = "Pack-TYPE transposons are a unique class of potentially mobile non-autonomous elements that can capture, merge and relocate fragments of chromosomal DNA. It has been postulated that their activity accelerates the evolution of host genes. However, this important presumption is based only on the sequences of currently inactive Pack-TYPE transposons and the acquisition of chromosomal DNA has not been recorded in real time. Analysing the DNA copy number variation in hypomethylated Arabidopsis lines, we have now for the first time witnessed the mobilization of novel Pack-TYPE elements related to the CACTA transposon family, over several plant generations. Remarkably, these elements can insert into genes as closely spaced direct repeats and they frequently undergo incomplete excisions, resulting in the deletion of one of the end sequences. These properties suggest a mechanism of efficient acquisition of genic DNA residing between neighbouring Pack-TYPE transposons and its subsequent mobilization. Our work documents crucial steps in the formation of in vivo novel Pack-TYPE transposons, and thus the possible mechanism of gene shuffling mediated by this type of mobile element.",
author = "Marco Catoni and Thomas Jonesman and Elisa Cerruti and Jerzy Paszkowski",
year = "2019",
month = feb,
day = "20",
doi = "10.1093/nar/gky1196",
language = "English",
volume = "47",
pages = "1311–1320",
journal = "Nucleic Acids Research",
issn = "0305-1048",
publisher = "Oxford University Press",
number = "3",

}

RIS

TY - JOUR

T1 - Mobilization of Pack-CACTA transposons in Arabidopsis suggests the mechanism of gene shuffling

AU - Catoni, Marco

AU - Jonesman, Thomas

AU - Cerruti, Elisa

AU - Paszkowski, Jerzy

PY - 2019/2/20

Y1 - 2019/2/20

N2 - Pack-TYPE transposons are a unique class of potentially mobile non-autonomous elements that can capture, merge and relocate fragments of chromosomal DNA. It has been postulated that their activity accelerates the evolution of host genes. However, this important presumption is based only on the sequences of currently inactive Pack-TYPE transposons and the acquisition of chromosomal DNA has not been recorded in real time. Analysing the DNA copy number variation in hypomethylated Arabidopsis lines, we have now for the first time witnessed the mobilization of novel Pack-TYPE elements related to the CACTA transposon family, over several plant generations. Remarkably, these elements can insert into genes as closely spaced direct repeats and they frequently undergo incomplete excisions, resulting in the deletion of one of the end sequences. These properties suggest a mechanism of efficient acquisition of genic DNA residing between neighbouring Pack-TYPE transposons and its subsequent mobilization. Our work documents crucial steps in the formation of in vivo novel Pack-TYPE transposons, and thus the possible mechanism of gene shuffling mediated by this type of mobile element.

AB - Pack-TYPE transposons are a unique class of potentially mobile non-autonomous elements that can capture, merge and relocate fragments of chromosomal DNA. It has been postulated that their activity accelerates the evolution of host genes. However, this important presumption is based only on the sequences of currently inactive Pack-TYPE transposons and the acquisition of chromosomal DNA has not been recorded in real time. Analysing the DNA copy number variation in hypomethylated Arabidopsis lines, we have now for the first time witnessed the mobilization of novel Pack-TYPE elements related to the CACTA transposon family, over several plant generations. Remarkably, these elements can insert into genes as closely spaced direct repeats and they frequently undergo incomplete excisions, resulting in the deletion of one of the end sequences. These properties suggest a mechanism of efficient acquisition of genic DNA residing between neighbouring Pack-TYPE transposons and its subsequent mobilization. Our work documents crucial steps in the formation of in vivo novel Pack-TYPE transposons, and thus the possible mechanism of gene shuffling mediated by this type of mobile element.

U2 - 10.1093/nar/gky1196

DO - 10.1093/nar/gky1196

M3 - Article

C2 - 30476196

VL - 47

SP - 1311

EP - 1320

JO - Nucleic Acids Research

JF - Nucleic Acids Research

SN - 0305-1048

IS - 3

ER -