Extending reference assembly models

Research output: Contribution to journalArticlepeer-review

Standard

Extending reference assembly models. / Church, Deanna M; Schneider, Valerie A; Steinberg, Karyn Meltz; Schatz, Michael C; Quinlan, Aaron R; Chin, Chen-Shan; Kitts, Paul A; Aken, Bronwen; Marth, Gabor T; Hoffman, Michael M; Herrero, Javier; Mendoza, M Lisandra Zepeda; Durbin, Richard; Flicek, Paul.

In: Genome Biology, Vol. 16, 24.01.2015, p. 13.

Research output: Contribution to journalArticlepeer-review

Harvard

Church, DM, Schneider, VA, Steinberg, KM, Schatz, MC, Quinlan, AR, Chin, C-S, Kitts, PA, Aken, B, Marth, GT, Hoffman, MM, Herrero, J, Mendoza, MLZ, Durbin, R & Flicek, P 2015, 'Extending reference assembly models', Genome Biology, vol. 16, pp. 13. https://doi.org/10.1186/s13059-015-0587-3

APA

Church, D. M., Schneider, V. A., Steinberg, K. M., Schatz, M. C., Quinlan, A. R., Chin, C-S., Kitts, P. A., Aken, B., Marth, G. T., Hoffman, M. M., Herrero, J., Mendoza, M. L. Z., Durbin, R., & Flicek, P. (2015). Extending reference assembly models. Genome Biology, 16, 13. https://doi.org/10.1186/s13059-015-0587-3

Vancouver

Church DM, Schneider VA, Steinberg KM, Schatz MC, Quinlan AR, Chin C-S et al. Extending reference assembly models. Genome Biology. 2015 Jan 24;16:13. https://doi.org/10.1186/s13059-015-0587-3

Author

Church, Deanna M ; Schneider, Valerie A ; Steinberg, Karyn Meltz ; Schatz, Michael C ; Quinlan, Aaron R ; Chin, Chen-Shan ; Kitts, Paul A ; Aken, Bronwen ; Marth, Gabor T ; Hoffman, Michael M ; Herrero, Javier ; Mendoza, M Lisandra Zepeda ; Durbin, Richard ; Flicek, Paul. / Extending reference assembly models. In: Genome Biology. 2015 ; Vol. 16. pp. 13.

Bibtex

@article{eb1864afe9c4454cbd6685a9d6989beb,
title = "Extending reference assembly models",
abstract = "The human genome reference assembly is crucial for aligning and analyzing sequence data, and for genome annotation, among other roles. However, the models and analysis assumptions that underlie the current assembly need revising to fully represent human sequence diversity. Improved analysis tools and updated data reporting formats are also required. ",
keywords = "Computational Biology/methods, Databases, Genetic, Genome, Human, Genomics/methods, Humans, Software",
author = "Church, {Deanna M} and Schneider, {Valerie A} and Steinberg, {Karyn Meltz} and Schatz, {Michael C} and Quinlan, {Aaron R} and Chen-Shan Chin and Kitts, {Paul A} and Bronwen Aken and Marth, {Gabor T} and Hoffman, {Michael M} and Javier Herrero and Mendoza, {M Lisandra Zepeda} and Richard Durbin and Paul Flicek",
year = "2015",
month = jan,
day = "24",
doi = "10.1186/s13059-015-0587-3",
language = "English",
volume = "16",
pages = "13",
journal = "Genome Biology",
issn = "1474-7596",
publisher = "BioMed Central",

}

RIS

TY - JOUR

T1 - Extending reference assembly models

AU - Church, Deanna M

AU - Schneider, Valerie A

AU - Steinberg, Karyn Meltz

AU - Schatz, Michael C

AU - Quinlan, Aaron R

AU - Chin, Chen-Shan

AU - Kitts, Paul A

AU - Aken, Bronwen

AU - Marth, Gabor T

AU - Hoffman, Michael M

AU - Herrero, Javier

AU - Mendoza, M Lisandra Zepeda

AU - Durbin, Richard

AU - Flicek, Paul

PY - 2015/1/24

Y1 - 2015/1/24

N2 - The human genome reference assembly is crucial for aligning and analyzing sequence data, and for genome annotation, among other roles. However, the models and analysis assumptions that underlie the current assembly need revising to fully represent human sequence diversity. Improved analysis tools and updated data reporting formats are also required.

AB - The human genome reference assembly is crucial for aligning and analyzing sequence data, and for genome annotation, among other roles. However, the models and analysis assumptions that underlie the current assembly need revising to fully represent human sequence diversity. Improved analysis tools and updated data reporting formats are also required.

KW - Computational Biology/methods

KW - Databases, Genetic

KW - Genome, Human

KW - Genomics/methods

KW - Humans

KW - Software

U2 - 10.1186/s13059-015-0587-3

DO - 10.1186/s13059-015-0587-3

M3 - Article

C2 - 25651527

VL - 16

SP - 13

JO - Genome Biology

JF - Genome Biology

SN - 1474-7596

ER -