Willem van Schaik

Willem van Schaik

Links

ORCID: 0000-0001-5832-0988

Colleges, School and Institutes

Education/Academic qualification

  • Wageningen University

    The role of the alternative sigma factor SigmaB in the stress response of Bacillus cereus

    1 Nov 2000 - 1 Feb 2005

  • Master in Science, Wageningen University

    Food Science

    1 Sep 1993 - 1 Sep 1998

Willingness to take PhD students

Yes

PhD projects

The application of genomic and metagenomic approaches to study the emergence of drug-resistance in opportunistic pathogens.

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Most downloaded publications

Prediction of the intestinal resistome by a three-dimensional structure-based method
Ruppé, E., Ghozlane, A., Tap, J., Pons, N., Alvarez, A-S., Maziers, N., Cuesta, T., Hernando-Amado, S., Clares, I., Martínez, J. L., Coque, T. M., Baquero, F., Lanza, V. F., Máiz, L., Goulenok, T., de Lastours, V., Amor, N., Fantin, B., Wieder, I., Andremont, A. & 16 others, Willem van Schaik, Rogers, M., Zhang, X., Willems, R. J. L., de Brevern, A. G., Batto, J-M., Blottière, H. M., Léonard, P., Léjard, V., Letur, A., Levenez, F., Weiszer, K., Haimet, F., Doré, J., Kennedy, S. P. & Ehrlich, S. D., 26 Nov 2018, In : Nature Microbiology. 4, p. 112-123 12 p.

Research output: Contribution to journal › Article

129 downloads
Deletions in a ribosomal protein-coding gene are associated with tigecycline resistance in Enterococcus faecium
Niebel, M., Joshua Quick, Prieto, A. M. G., Hill, R. L. R., Pike, R., Damon Huber, David, M., Hornsey, M., Wareham, D., Oppenheim, B., Woodford, N., Willem van Schaik & Nicholas Loman, 20 Aug 2015, In : International Journal of Antimicrobial Agents.

Research output: Contribution to journal › Article

77 downloads
Global Emergence and Dissemination of Enterococci as Nosocomial Pathogens: Attack of the Clones?
Guzman Prieto, A. M., Willem van Schaik, Rogers, M. R. C., Coque, T. M., Baquero, F., Corander, J. & Willems, R. J. L., 26 May 2016, In : Frontiers in Microbiology. 7, 788.

Research output: Contribution to journal › Article

69 downloads
On the (im)possibility of reconstructing plasmids from whole-genome short-read sequencing data
Arredondo-Alonso, S., Willems, R. J., Willem van Schaik & Schürch, A. C., 1 Oct 2017, In : Microbial Genomics. 3, 10, 8 p., e000128.

Research output: Contribution to journal › Article

68 downloads
RNA-seq and Tn-seq reveal fitness determinants of vancomycin-resistant Enterococcus faecium during growth in human serum
Zhang, X., de Maat, V., Guzmán Prieto, A. M., Prajsnar, T. K., Bayjanov, J. R., de Been, M., Rogers, M. R. C., Bonten, M. J. M., Mesnage, S., Willems, R. J. L. & Willem van Schaik, 21 Nov 2017, In : BMC Genomics. 18, 1, 12 p., 893.

Research output: Contribution to journal › Article

56 downloads

Recent publications

Tandem amplification of the vanM gene cluster drives vancomycin resistance in vancomycin-variable enterococci
Sun, L., Chen, Y., Hua, X., Chen, Y., Hong, J., Wu, X., Jiang, Y., Willem van Schaik, Qu, T. & Yu, Y., 19 Nov 2019, In : Journal of Antimicrobial Chemotherapy.

Research output: Contribution to journal › Article

Gut microbiota and colonization resistance against bacterial enteric infection
Ducarmon, Q. R., Zwittink, R. D., Hornung, B. V. H., Willem van Schaik, Young, V. B. & Kuijper, E. J., 1 Sep 2019, In : Microbiology and Molecular Biology Reviews. 83, 3, p. e00007-e00019

Research output: Contribution to journal › Review article

Enterococcus faecium genome dynamics during long-term asymptomatic patient gut colonization
Bayjanov, J. R., Baan, J., Rogers, M. R. C., Troelstra, A., Willems, R. J. L. & Willem van Schaik, 1 Jul 2019, In : Microbial Genomics. 5, 7, 000277.

Research output: Contribution to journal › Article

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