Bioinformatics, 1367-4803

Journal

Publications

  1. 2020
  2. Published

    Struct: an R/bioconductor-based framework for standardised metabolomics data analysis and beyond

    Andris Jankevics & Ralf Weber, Dec 2020, In: Bioinformatics. 36, 22-23, p. 5551–5552

    Research output: Contribution to journalArticlepeer-review

  3. E-pub ahead of print

    Colour Deconvolution – stain unmixing in histological imaging

    Gabriel Landini, 30 Sep 2020, (E-pub ahead of print) In: Bioinformatics.

    Research output: Contribution to journalArticlepeer-review

  4. Accepted/In press

    PoLoBag: Polynomial Lasso Bagging for signed gene regulatory network inference from expression data

    Shan He, 13 Jul 2020, (Accepted/In press) In: Bioinformatics. 7 p.

    Research output: Contribution to journalArticlepeer-review

  5. Published
  6. 2019
  7. E-pub ahead of print

    ATEN: And/Or Tree Ensemble for inferring accurate Boolean network topology and dynamics

    David Parker & Shan He, 17 Jul 2019, (E-pub ahead of print) In: Bioinformatics. 8 p., btz563.

    Research output: Contribution to journalArticlepeer-review

  8. 2018
  9. Published

    Ontology-based validation and identification of regulatory phenotypes

    Georgios Gkoutos, 1 Sep 2018, In: Bioinformatics. 34, 17, p. i857-i865

    Research output: Contribution to journalArticlepeer-review

  10. E-pub ahead of print

    A descriptive marker gene approach to single-cell pseudotime inference

    Christopher Yau, 23 Jun 2018, (E-pub ahead of print) In: Bioinformatics. bty498.

    Research output: Contribution to journalArticlepeer-review

  11. 2017
  12. E-pub ahead of print

    RepLong - de novo repeat identification using long read sequencing data

    Shan He, 6 Nov 2017, (E-pub ahead of print) In: Bioinformatics. 9 p., btx717.

    Research output: Contribution to journalArticlepeer-review

  13. Published

    switchde: inference of switch-like differential expression along single-cell trajectories

    Christopher Yau, 15 Apr 2017, In: Bioinformatics. 33, 8, p. 1241-1242 2 p.

    Research output: Contribution to journalArticlepeer-review

  14. Published

    Quantification of fibrous spatial point patterns from single-molecule localization microscopy (SMLM) data

    Dylan Owen, 20 Jan 2017, In: Bioinformatics. 33, 11, p. 1703-1711 9 p.

    Research output: Contribution to journalArticlepeer-review

  15. 2016
  16. Published

    Goldilocks: A tool for identifying genomic regions that are ‘just right’

    Samuel Nicholls, 1 Jul 2016, In: Bioinformatics.

    Research output: Contribution to journalArticlepeer-review

  17. Published

    PharmacoGx: an R package for analysis of large pharmacogenomic datasets

    Dong Wang, Deena M A Gendoo, 15 Apr 2016, In: Bioinformatics. 32, 8, p. 1244-1246 3 p.

    Research output: Contribution to journalArticlepeer-review

  18. Published

    Genefu: an R/Bioconductor package for computation of gene expression-based signatures in breast cancer

    Deena M A Gendoo, 1 Apr 2016, In: Bioinformatics. 32, 7, p. 1097-1099 3 p.

    Research output: Contribution to journalArticlepeer-review

  19. Published

    contamDE: differential expression analysis of RNA-seq data for contaminated tumor samples

    Zewei Luo, 1 Mar 2016, In: Bioinformatics. 32, 5, p. 705-12 8 p.

    Research output: Contribution to journalArticlepeer-review

  20. 2015
  21. Published
  22. 2014
  23. Published

    Poretools: a toolkit for analyzing nanopore sequence data

    Nicholas Loman, 1 Dec 2014, In: Bioinformatics. 30, 23, p. 3399-401 3 p.

    Research output: Contribution to journalArticlepeer-review

  24. Published

    Novel function discovery with GeneMANIA: a new integrated resource for gene function prediction in Escherichia coli

    Roland Arnold, 13 Oct 2014, In: Bioinformatics. 31, 3, p. 306-310 5 p.

    Research output: Contribution to journalArticlepeer-review

  25. Published

    Mouse model phenotypes provide information about human drug targets

    Georgios Gkoutos, 1 Mar 2014, In: Bioinformatics. 30, 5, p. 719-725 7 p.

    Research output: Contribution to journalArticlepeer-review

  26. Published

    Derivative processes for modelling metabolic fluxes

    Justina Zurauskiene, 26 Feb 2014, In: Bioinformatics. 30, 13, p. 1892-1898 7 p.

    Research output: Contribution to journalArticlepeer-review

  27. Published

    HAMMER: automated operation of mass frontier to construct in silico mass spectral fragmentation libraries

    Ralf Weber, Will Allwood, Warwick Dunn, Shan He & Mark Viant, 15 Feb 2014, In: Bioinformatics. 30, 4, p. 581-583

    Research output: Contribution to journalArticlepeer-review

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