The BitMap dataset, an open dataset on performance assessment of diffuse optics instruments

David Orive-Miguel; Pranav Lanka; Lin Yang; Susanna Tagliabue; Aleh Sudakou; Saeed Samaei; Joshua Deepak Veesa; Mario Forcione; Zuzana Kovacsova; Anurag Behera; Lionel Hervé; Turgut Durduran; Adam Liebert; Piotr Sawosz; Antonio Belli; Ilias Tachtsidis; Alberto Dalla Mora; Jérôme Mars; Laurent Condat; Alessandro Torricelli; Hamid Dehghani; Heidrun Wabnitz; Antonio Pifferi

doi:10.1117/12.2526728

The BitMap dataset, an open dataset on performance assessment of diffuse optics instruments

David Orive-Miguel^*, Pranav Lanka, Lin Yang, Susanna Tagliabue, Aleh Sudakou, Saeed Samaei, Joshua Deepak Veesa, Mario Forcione, Zuzana Kovacsova, Anurag Behera, Lionel Hervé, Turgut Durduran, Adam Liebert, Piotr Sawosz, Antonio Belli, Ilias Tachtsidis, Alberto Dalla Mora, Jérôme Mars, Laurent Condat, Alessandro TorricelliHamid Dehghani, Heidrun Wabnitz, Antonio Pifferi

^*Corresponding author for this work

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

Abstract

Open Data philosophy is becoming more popular among scientists. Open Data approach aims to transform science by making high-quality and well-documented scientific data open to everybody in order to promote collaboration and transparency. In diffuse optical and near-infrared spectroscopy community, a large measurement dataset collected with state-of-the-art instrumentation applied on well-defined phantoms is still missing. Within that context, several European labs from BitMap network¹ have collected diffuse optical data on standard phantoms involving the largest set of diffuse optics instruments published until now. In this work, we present a running project on the open dataset and associated reporting tools.

Original language	English
Title of host publication	European Conference on Biomedical Optics, ECBO_2019
Publisher	Optica Publishing Group (formerly OSA)
ISBN (Print)	9781510628397
DOIs	https://doi.org/10.1117/12.2526728
Publication status	Published - 2019
Event	European Conference on Biomedical Optics, ECBO_2019 - Munich, Netherlands Duration: 23 Jun 2019 → 25 Jun 2019

Publication series

Name	Optics InfoBase Conference Papers
Volume	Part F142-ECBO 2019
ISSN (Electronic)	2162-2701

Conference

Conference	European Conference on Biomedical Optics, ECBO_2019
Country/Territory	Netherlands
City	Munich
Period	23/06/19 → 25/06/19

Bibliographical note

Funding Information:
This project has received funding from the European Union’s Horizon 2020 Marie Sk lodowska-Curie Innovative Training Networks (ITN-ETN) programme, under grant agreement no 675332 BitMap.

Publisher Copyright:
© SPIE-OSA 2019

Keywords

Diffuse optics
HDF5
Near-infrared spectrocopy
Open data
Scientific data

ASJC Scopus subject areas

Electronic, Optical and Magnetic Materials
Mechanics of Materials

Access to Document

10.1117/12.2526728

Cite this

Orive-Miguel, D., Lanka, P., Yang, L., Tagliabue, S., Sudakou, A., Samaei, S., Veesa, J. D., Forcione, M., Kovacsova, Z., Behera, A., Hervé, L., Durduran, T., Liebert, A., Sawosz, P., Belli, A., Tachtsidis, I., Mora, A. D., Mars, J., Condat, L., ... Pifferi, A. (2019). The BitMap dataset, an open dataset on performance assessment of diffuse optics instruments. In European Conference on Biomedical Optics, ECBO_2019 (Optics InfoBase Conference Papers; Vol. Part F142-ECBO 2019). Optica Publishing Group (formerly OSA). https://doi.org/10.1117/12.2526728

@inproceedings{4b34af020cdf45a59a9080213b4ab733,

title = "The BitMap dataset, an open dataset on performance assessment of diffuse optics instruments",

abstract = "Open Data philosophy is becoming more popular among scientists. Open Data approach aims to transform science by making high-quality and well-documented scientific data open to everybody in order to promote collaboration and transparency. In diffuse optical and near-infrared spectroscopy community, a large measurement dataset collected with state-of-the-art instrumentation applied on well-defined phantoms is still missing. Within that context, several European labs from BitMap network1 have collected diffuse optical data on standard phantoms involving the largest set of diffuse optics instruments published until now. In this work, we present a running project on the open dataset and associated reporting tools.",

keywords = "Diffuse optics, HDF5, Near-infrared spectrocopy, Open data, Scientific data",

author = "David Orive-Miguel and Pranav Lanka and Lin Yang and Susanna Tagliabue and Aleh Sudakou and Saeed Samaei and Veesa, {Joshua Deepak} and Mario Forcione and Zuzana Kovacsova and Anurag Behera and Lionel Herv{\'e} and Turgut Durduran and Adam Liebert and Piotr Sawosz and Antonio Belli and Ilias Tachtsidis and Mora, {Alberto Dalla} and J{\'e}r{\^o}me Mars and Laurent Condat and Alessandro Torricelli and Hamid Dehghani and Heidrun Wabnitz and Antonio Pifferi",

note = "Funding Information: This project has received funding from the European Union{\textquoteright}s Horizon 2020 Marie Sk lodowska-Curie Innovative Training Networks (ITN-ETN) programme, under grant agreement no 675332 BitMap. Publisher Copyright: {\textcopyright} SPIE-OSA 2019; European Conference on Biomedical Optics, ECBO_2019 ; Conference date: 23-06-2019 Through 25-06-2019",

year = "2019",

doi = "10.1117/12.2526728",

language = "English",

isbn = "9781510628397",

series = "Optics InfoBase Conference Papers",

publisher = "Optica Publishing Group (formerly OSA)",

booktitle = "European Conference on Biomedical Optics, ECBO_2019",

}

Orive-Miguel, D, Lanka, P, Yang, L, Tagliabue, S, Sudakou, A, Samaei, S, Veesa, JD, Forcione, M, Kovacsova, Z, Behera, A, Hervé, L, Durduran, T, Liebert, A, Sawosz, P, Belli, A, Tachtsidis, I, Mora, AD, Mars, J, Condat, L, Torricelli, A, Dehghani, H, Wabnitz, H & Pifferi, A 2019, The BitMap dataset, an open dataset on performance assessment of diffuse optics instruments. in European Conference on Biomedical Optics, ECBO_2019. Optics InfoBase Conference Papers, vol. Part F142-ECBO 2019, Optica Publishing Group (formerly OSA), European Conference on Biomedical Optics, ECBO_2019, Munich, Netherlands, 23/06/19. https://doi.org/10.1117/12.2526728

The BitMap dataset, an open dataset on performance assessment of diffuse optics instruments. / Orive-Miguel, David; Lanka, Pranav; Yang, Lin et al.
European Conference on Biomedical Optics, ECBO_2019. Optica Publishing Group (formerly OSA), 2019. (Optics InfoBase Conference Papers; Vol. Part F142-ECBO 2019).

Research output: Chapter in Book/Report/Conference proceeding › Conference contribution

TY - GEN

T1 - The BitMap dataset, an open dataset on performance assessment of diffuse optics instruments

AU - Orive-Miguel, David

AU - Lanka, Pranav

AU - Yang, Lin

AU - Tagliabue, Susanna

AU - Sudakou, Aleh

AU - Samaei, Saeed

AU - Veesa, Joshua Deepak

AU - Forcione, Mario

AU - Kovacsova, Zuzana

AU - Behera, Anurag

AU - Hervé, Lionel

AU - Durduran, Turgut

AU - Liebert, Adam

AU - Sawosz, Piotr

AU - Belli, Antonio

AU - Tachtsidis, Ilias

AU - Mora, Alberto Dalla

AU - Mars, Jérôme

AU - Condat, Laurent

AU - Torricelli, Alessandro

AU - Dehghani, Hamid

AU - Wabnitz, Heidrun

AU - Pifferi, Antonio

N1 - Funding Information: This project has received funding from the European Union’s Horizon 2020 Marie Sk lodowska-Curie Innovative Training Networks (ITN-ETN) programme, under grant agreement no 675332 BitMap. Publisher Copyright: © SPIE-OSA 2019

PY - 2019

Y1 - 2019

N2 - Open Data philosophy is becoming more popular among scientists. Open Data approach aims to transform science by making high-quality and well-documented scientific data open to everybody in order to promote collaboration and transparency. In diffuse optical and near-infrared spectroscopy community, a large measurement dataset collected with state-of-the-art instrumentation applied on well-defined phantoms is still missing. Within that context, several European labs from BitMap network1 have collected diffuse optical data on standard phantoms involving the largest set of diffuse optics instruments published until now. In this work, we present a running project on the open dataset and associated reporting tools.

AB - Open Data philosophy is becoming more popular among scientists. Open Data approach aims to transform science by making high-quality and well-documented scientific data open to everybody in order to promote collaboration and transparency. In diffuse optical and near-infrared spectroscopy community, a large measurement dataset collected with state-of-the-art instrumentation applied on well-defined phantoms is still missing. Within that context, several European labs from BitMap network1 have collected diffuse optical data on standard phantoms involving the largest set of diffuse optics instruments published until now. In this work, we present a running project on the open dataset and associated reporting tools.

KW - Diffuse optics

KW - HDF5

KW - Near-infrared spectrocopy

KW - Open data

KW - Scientific data

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U2 - 10.1117/12.2526728

DO - 10.1117/12.2526728

M3 - Conference contribution

AN - SCOPUS:85084511034

SN - 9781510628397

T3 - Optics InfoBase Conference Papers

BT - European Conference on Biomedical Optics, ECBO_2019

PB - Optica Publishing Group (formerly OSA)

T2 - European Conference on Biomedical Optics, ECBO_2019

Y2 - 23 June 2019 through 25 June 2019

ER -

The BitMap dataset, an open dataset on performance assessment of diffuse optics instruments

Abstract

Publication series

Conference

Bibliographical note

Keywords

ASJC Scopus subject areas

Access to Document

Fingerprint

Cite this