Evidence of a pan-tissue decline in stemness during human aging

Gabriel Arantes Dos Santos, Gustavo Daniel Vega Magdaleno, João Pedro de Magalhães*

*Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

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Abstract

Despite their biological importance, the role of stem cells in human aging remains to be elucidated. In this work, we applied a machine learning methodology to GTEx transcriptome data and assigned stemness scores to 17,382 healthy samples from 30 human tissues aged between 20 and 79 years. We found that ~60% of the studied tissues exhibit a significant negative correlation between the subject's age and stemness score. The only significant exception was the uterus, where we observed an increased stemness with age. Moreover, we observed that stemness is positively correlated with cell proliferation and negatively correlated with cellular senescence. Finally, we also observed a trend that hematopoietic stem cells derived from older individuals might have higher stemness scores. In conclusion, we assigned stemness scores to human samples and show evidence of a pan-tissue loss of stemness during human aging, which adds weight to the idea that stem cell deterioration may contribute to human aging.

Original languageEnglish
Pages (from-to)5796-5810
Number of pages15
JournalAging
Volume16
Issue number7
DOIs
Publication statusPublished - 4 Apr 2024

Keywords

  • Humans
  • Aging/physiology
  • Aged
  • Middle Aged
  • Adult
  • Female
  • Cellular Senescence/physiology
  • Stem Cells/metabolism
  • Male
  • Cell Proliferation
  • Young Adult
  • Transcriptome
  • Machine Learning
  • Hematopoietic Stem Cells/metabolism

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