Computational tools and workflows in metabolomics: An international survey highlights the opportunity for harmonisation through Galaxy

Ralf J M Weber; Thomas N. Lawson; Reza M. Salek; Timothy M D Ebbels; Robert C. Glen; Royston Goodacre; Julian L. Griffin; Kenneth Haug; Albert Koulman; Pablo Moreno; Markus Ralser; Christoph Steinbeck; Warwick B. Dunn; Mark R. Viant

doi:10.1007/s11306-016-1147-x

Computational tools and workflows in metabolomics: An international survey highlights the opportunity for harmonisation through Galaxy

Ralf J M Weber
, Thomas N. Lawson
, Reza M. Salek
, Timothy M D Ebbels
, Robert C. Glen
, Royston Goodacre
, Julian L. Griffin
, Kenneth Haug
, Albert Koulman
, Pablo Moreno
, Markus Ralser
, Christoph Steinbeck
, Warwick B. Dunn
, Mark R. Viant^*

^*Corresponding author for this work

Biosciences

Research output: Contribution to journal › Letter › peer-review

50 Citations (Scopus)

267 Downloads (Pure)

Original language	English
Article number	12
Journal	Metabolomics
Volume	13
Issue number	2
Early online date	27 Dec 2016
DOIs	https://doi.org/10.1007/s11306-016-1147-x
Publication status	Published - 1 Feb 2017

UN SDGs

This output contributes to the following UN Sustainable Development Goals (SDGs)

SDG 3 Good Health and Well-being

ASJC Scopus subject areas

Endocrinology, Diabetes and Metabolism
Biochemistry
Clinical Biochemistry

Access to Document

10.1007/s11306-016-1147-xLicence: Creative Commons: Attribution (CC BY)

Weber_et_al_Computational_tools_and_workflows_Metabolomics_2017
Checked for eligibility: 16/01/2017
Final published version, 462 KBLicence: Creative Commons: Attribution (CC BY)

Next generation tools for the annotation of metabolites in global LC-MS metabolomic studies
Dunn, W. (Principal Investigator), He, S. (Co-Investigator), Viant, M. (Co-Investigator) & Weber, R. (Co-Investigator)
Biotechnology & Biological Sciences Research Council
1/10/16 → 31/12/17
Project: Research Councils
Open source pipelines for integrated metabolomics analysis by NMR and mass spectrometry
Viant, M. (Principal Investigator), Dunn, W. (Co-Investigator) & Weber, R. (Co-Investigator)
Biotechnology & Biological Sciences Research Council
1/09/15 → 31/12/16
Project: Research Councils
Delivering ELIXIR-UK
Viant, M. (Principal Investigator) & Dunn, W. (Co-Investigator)
Biotechnology & Biological Sciences Research Council
31/03/14 → 30/03/17
Project: Research Councils

Birmingham Environment for Academic Research (BEAR)
Facility/equipment: Equipment

Cite this

Weber, R. J. M., Lawson, T. N., Salek, R. M., Ebbels, T. M. D., Glen, R. C., Goodacre, R., Griffin, J. L., Haug, K., Koulman, A., Moreno, P., Ralser, M., Steinbeck, C., Dunn, W. B., & Viant, M. R. (2017). Computational tools and workflows in metabolomics: An international survey highlights the opportunity for harmonisation through Galaxy. Metabolomics, 13(2), Article 12. https://doi.org/10.1007/s11306-016-1147-x

@article{a002ff62a8a04c97985f7c491337f22a,

title = "Computational tools and workflows in metabolomics: An international survey highlights the opportunity for harmonisation through Galaxy",

author = "Weber, \{Ralf J M\} and Lawson, \{Thomas N.\} and Salek, \{Reza M.\} and Ebbels, \{Timothy M D\} and Glen, \{Robert C.\} and Royston Goodacre and Griffin, \{Julian L.\} and Kenneth Haug and Albert Koulman and Pablo Moreno and Markus Ralser and Christoph Steinbeck and Dunn, \{Warwick B.\} and Viant, \{Mark R.\}",

year = "2017",

month = feb,

day = "1",

doi = "10.1007/s11306-016-1147-x",

language = "English",

volume = "13",

journal = "Metabolomics",

issn = "1573-3882",

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}

Weber, RJM, Lawson, TN, Salek, RM, Ebbels, TMD, Glen, RC, Goodacre, R, Griffin, JL, Haug, K, Koulman, A, Moreno, P, Ralser, M, Steinbeck, C, Dunn, WB & Viant, MR 2017, 'Computational tools and workflows in metabolomics: An international survey highlights the opportunity for harmonisation through Galaxy', Metabolomics, vol. 13, no. 2, 12. https://doi.org/10.1007/s11306-016-1147-x

TY - JOUR

T1 - Computational tools and workflows in metabolomics

T2 - An international survey highlights the opportunity for harmonisation through Galaxy

AU - Weber, Ralf J M

AU - Lawson, Thomas N.

AU - Salek, Reza M.

AU - Ebbels, Timothy M D

AU - Glen, Robert C.

AU - Goodacre, Royston

AU - Griffin, Julian L.

AU - Haug, Kenneth

AU - Koulman, Albert

AU - Moreno, Pablo

AU - Ralser, Markus

AU - Steinbeck, Christoph

AU - Dunn, Warwick B.

AU - Viant, Mark R.

PY - 2017/2/1

Y1 - 2017/2/1

UR - https://www.scopus.com/pages/publications/85007135362

U2 - 10.1007/s11306-016-1147-x

DO - 10.1007/s11306-016-1147-x

M3 - Letter

AN - SCOPUS:85007135362

SN - 1573-3882

VL - 13

JO - Metabolomics

JF - Metabolomics

IS - 2

M1 - 12

ER -

Computational tools and workflows in metabolomics: An international survey highlights the opportunity for harmonisation through Galaxy

UN SDGs

ASJC Scopus subject areas

Access to Document

Projects

Next generation tools for the annotation of metabolites in global LC-MS metabolomic studies

Open source pipelines for integrated metabolomics analysis by NMR and mass spectrometry

Delivering ELIXIR-UK

Equipment

Birmingham Environment for Academic Research (BEAR)

Cite this