Research output per year
Research output per year
Personal profile
Research interests
- Mathematical and computational modelling of complex biological and medical systems
- Mechanistic modelling of bacteria biofilms and antimicrobial resistance
- Parameter inference techniques
- Deep learning for image classification
- Interpretable machine learning for clinical predictions
Education/Academic qualification
Doctor of Science, Unravelling the effect of metal ions leaching from bioactive glasses on wound associated biofilms, The University of Birmingham
30 Sept 2019 → 31 Jul 2024
Award Date: 31 Jul 2024
Master of Mathematics and Physics, Msci Theoretical Physics and Applied Mathematics, The University of Birmingham
30 Sept 2015 → 31 Jul 2019
Award Date: 31 Jul 2019
Keywords
- Q Science (General)
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Collaborations and top research areas from the last five years
Recent external collaboration on country/territory level. Dive into details by clicking on the dots or
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A partial differential equation model of a novel treatment for chronic wound biofilm infections
Shirgill, S., Begum, N., Kuehne, S. A., Poologasundarampillai, G., Jabbari, S. & Ward, J., Feb 2026, In: Clinical Biomechanics. 132, 21 p., 106744.Research output: Contribution to journal › Article › peer-review
Open AccessFile20 Downloads (Pure) -
Birmingham Environment for Academic Research: Case Study Vol. 5
Ghumra, A. (Editor), Taskin, A. (Contributor), Das, A. (Contributor), Abbas, A. (Contributor), Yang, C. (Contributor), Owen, D. (Contributor), Barbour, E. (Contributor), Allman, E. (Contributor), Al-Gburi, F. (Contributor), Khaleel, F. (Contributor), Wilson, G. (Contributor), Luo, G. (Contributor), Saddal, H. (Contributor), Hein-Paar, J. (Contributor), Riddell, J. (Contributor), Lewis, J. (Contributor), Nutter, K. (Contributor), Mijic, L. (Contributor), Butt, L. (Contributor) & Tavakol , M. (Contributor) & 8 others, , 2026, University of Birmingham. 30 p.Research output: Book/Report › Other report
Open Access -
Measuring the similarity of single-molecule localization microscopy derived marked point clouds
Savoye, K., Nieves, D. J., Shirgill, S., Lewis, A., Spill, F. & Owen, D. M., 16 Sept 2025, In: Biophysical Journal. 124, 18, p. 2931-2940 10 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile49 Downloads (Pure) -
Nano-org, a functional resource for single-molecule localisation microscopy data
Shirgill, S., Nieves, D., Pike, J., Ahmed, M., Abbott, H., Baragilly, M., Savoye, K., Worboys, J. D., Hazime, K. S., Bruggeman, E., Garcia, A., Williamson, D. J., Rubin-Delanchy, P., Peters, R., Davis, D. M., Henriques, R., Lee, S. F. & Owen, D., 30 Sept 2025, In: Nature Communications. 16, 7 p., 8674.Research output: Contribution to journal › Article › peer-review
Open AccessFile13 Downloads (Pure)
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EPSRC IAA (2022-26): Machine Learning Assisted Diagnosis of Acute Compartment Syndrome via a Web Application
Shang, X. (Principal Investigator), Vasanthi Bathrinarayanan, P. (Co-Investigator) & Shirgill, S. (Co-Investigator)
Engineering & Physical Science Research Council
1/04/25 → 31/12/26
Project: Research Councils
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Computational Modelling of Antimicrobial Synergy
Shirgill, S. (Principal Investigator)
1/05/27 → 30/04/30
Project: Research
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ASKSiD: Personalised, Agent-Based Post-Stroke Information Tool (Subproject of 1002998)
Shirgill, S. (Principal Investigator)
Engineering & Physical Science Research Council
1/10/25 → 30/06/26
Project: Research Councils
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Sandeep Shirgill N-CODE (Subproject of 1002998)
Shirgill, S. (Principal Investigator)
Engineering & Physical Science Research Council
1/01/25 → 31/08/25
Project: Research Councils
Datasets
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Experimental data, parameter estimation and numerical solutions for biofilm treatment PDEs
Shirgill, S. (Creator), University of Birmingham, 5 Aug 2026
DOI: 10.25500/edata.bham.00001733
Dataset
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Numerical solutions for chronic wound healing with treatment PDEs
Shirgill, S. (Creator), University of Birmingham, 3 Feb 2025
DOI: 10.25500/edata.bham.00001238
Dataset