Research output per year
Research output per year
- 42 results
Search results
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2024
Primed to persevere: Hypoxia regulation from epigenome to protein accumulation in plants
Gibbs, D., Theodoulou, F. L. & Bailey-Serres, J., 31 Oct 2024, (E-pub ahead of print) In: Plant Physiology. kiae584.Research output: Contribution to journal › Article › peer-review
Open AccessFile5 Downloads (Pure) -
The lowdown on breakdown: Open questions in plant proteolysis
Eckardt, N. A., Avin-Wittenberg, T., Bassham, D. C., Chen, P., Chen, Q., Fang, J., Genschik, P., Ghifari, A. S., Guercio, A. M., Gibbs, D., Heese, M., Jarvis, R. P., Michaeli, S., Murcha, M. W., Mursalimov, S., Noir, S., Palayam, M., Peixoto, B., Rodriguez, P. L. & Schaller, A. & 11 others, , Sept 2024, In: The Plant Cell. 36, 9, p. 2931-2975 45 p.Research output: Contribution to journal › Review article › peer-review
Open AccessFile21 Downloads (Pure) -
2023
Nt-acetylation-independent turnover of SQUALENE EPOXIDASE 1 by Arabidopsis DOA10-like E3 ligases
Etherington, R., Bailey, M., Boyer, J.-B., Armbruster, L., Cao, X., Coates, J., Meinnel, T., Wirtz, M., Giglione, C. & Gibbs, D., Nov 2023, In: Plant Physiology. 193, 3, p. 2086–2104Research output: Contribution to journal › Article › peer-review
Open AccessFile73 Downloads (Pure) -
2022
A stable start: cotranslational Nt-acetylation promotes proteome stability across kingdoms
Gibbs, D. J., Bailey, M. & Etherington, R. D., 5 Mar 2022, (E-pub ahead of print) In: Trends in Cell Biology. 32, 5, p. 374-376Research output: Contribution to journal › Article
Open AccessFile92 Downloads (Pure) -
Disruption of the nα-acetyltransferase NatB causes sensitivity to reductive stress in Arabidopsis thaliana
Huber, M., Armbruster, L., Etherington, R. D., De La Torre, C., Hawkesford, M. J., Sticht, C., Gibbs, D. J., Hell, R. & Wirtz, M., 3 Jan 2022, In: Frontiers in Plant Science. 12, 15 p., 799954.Research output: Contribution to journal › Article › peer-review
Open AccessFile80 Downloads (Pure) -
High on oxygen
Gibbs, D. J. & Osborne, R., Jul 2022, In: Nature Plants. 8, p. 731–732 2 p.Research output: Contribution to journal › Comment/debate
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Mitochondrial retrograde signaling through UCP1-mediated inhibition of the plant oxygen-sensing pathway
Barreto, P., Dambire, C., Sharma, G., Vicente, J., Osborne, R., Yassitepe, J., Gibbs, D. J., Maia, I. G., Holdsworth, M. J. & Arruda, P., 28 Mar 2022, In: Current Biology. 32, 6, p. 1403-1411.e4Research output: Contribution to journal › Article › peer-review
Open AccessFile74 Downloads (Pure) -
Retraction Note: The Arabidopsis NOT4A E3 ligase promotes PGR3 expression and regulates chloroplast translation
Bailey, M., Ivanauskaite, A., Grimmer, J., Akintewe, O., Payne, A. C., Osborne, R., Labandera, A.-M., Etherington, R. D., Rantala, M., Baginsky, S., Mulo, P. & Gibbs, D. J., 20 May 2022, In: Nature Communications. 13, 15 p., 2913.Research output: Contribution to journal › Comment/debate
Open Access -
2021
Altered collective mitochondrial dynamics in an Arabidopsis msh1 mutant compromising organelle DNA maintenance
Chustecki, J. M., Etherington, R. D., Gibbs, D. J. & Johnston, I. G., 24 Oct 2021, bioRxiv.Research output: Working paper/Preprint › Preprint
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Network analysis of Arabidopsis mitochondrial dynamics reveals a resolved tradeoff between physical distribution and social connectivity
Chustecki, J. M., Gibbs, D. J., Bassel, G. W. & Johnston, I. G., 19 May 2021, In: Cell Systems. 12, 5, p. 419-431.e4 18 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile103 Downloads (Pure) -
RETRACTED ARTICLE: The Arabidopsis NOT4A E3 ligase promotes PGR3 expression and regulates chloroplast translation
Bailey, M., Ivanauskaite, A., Grimmer, J., Akintewe, O., Payne, A. C., Osborne, R., Labandera, A.-M., Etherington, R. D., Rantala, M., Baginsky, S., Mulo, P. & Gibbs, D. J., Dec 2021, In: Nature Communications. 12, 1, 15 p., 251.Research output: Contribution to journal › Article › peer-review
Open AccessFile2 Citations (Scopus)165 Downloads (Pure) -
The PRT6 N-degron pathway restricts VERNALIZATION 2 to endogenous hypoxic niches to modulate plant development
Labandera, A., Tedds, H. M., Bailey, M., Sprigg, C., Etherington, R. D., Akintewe, O., Kalleechurn, G., Holdsworth, M. J. & Gibbs, D. J., Jan 2021, In: New Phytologist. 229, 1, p. 126-139 14 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile7 Citations (Scopus)178 Downloads (Pure) -
2020
Comparative biology of oxygen sensing in plants and animals
Holdsworth, M. & Gibbs, D., 20 Apr 2020, In: Current Biology. 30, 8, p. R362-R369 8 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile3 Citations (Scopus)152 Downloads (Pure) -
How to build an effective research network: lessons from two decades of the GARNet plant science community
Parry, G., Benitez-Alfonso, Y., Gibbs, D. J., Grant, M., Harper, A., Harrison, C. J., Kaiserli, E., Leonelli, S., May, S., McKim, S., Spoel, S., Turnbull, C., van der Hoorn, R. A. L. & Murray, J., 31 Dec 2020, In: Journal of Experimental Botany. 71, 22, p. 6881-6889 9 p.Research output: Contribution to journal › Article › peer-review
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2019
Ethylene-mediated nitric oxide depletion pre-adapts plants to hypoxia stress
Hartman, S., Liu, Z., van Veen, H., Vicente, J., Reinen, E., Martopawiro, S., Zhang, H., van Dongen, N., Bosman, F., Bassel, G. W., Visser, E. J. W., Bailey-Serres, J., Theodoulou, F. L., Hebelstrup, K. H., Gibbs, D. J., Holdsworth, M. J., Sasidharan, R. & Voesenek, L. A. C. J., 5 Sept 2019, In: Nature Communications. 10, 1, 9 p., 4020.Research output: Contribution to journal › Article › peer-review
Open AccessFile49 Citations (Scopus)307 Downloads (Pure) -
Every breath you take: new insights into plant and animal oxygen sensing
Gibbs, D. J. & Holdsworth, M. J., 22 Nov 2019, (E-pub ahead of print) In: Cell. 180, 1, p. 22-24Research output: Contribution to journal › Article › peer-review
Open AccessFile6 Citations (Scopus)133 Downloads (Pure) -
Regulatory cascade involving transcriptional and N-end rule pathways in rice under submergence
Lin, C.-C., Chao, Y.-T., Chen, W.-C., Ho, H.-Y., Chou, M.-Y., Li, Y.-R., Wu, Y.-L., Yang, H.-A., Hsieh, H., Lin, C.-S., Wu, F.-H., Chou, S.-J., Jen, H.-C., Huang, Y.-H., Irene, D., Wu, W.-J., Wu, J.-L., Gibbs, D. J., Ho, M.-C. & Shih, M.-C., 5 Feb 2019, In: Proceedings of the National Academy of Sciences of the United States of America. 116, 8, p. 3300-3309 10 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile24 Citations (Scopus)247 Downloads (Pure) -
2018
Developmental control of hypoxia during bud burst in grapevine
Meitha, K., Agudelo-Romero, P., Signorelli, S., Gibbs, D. J., Considine, J. A., Foyer, C. H. & Considine, M. J., 15 Jan 2018, (E-pub ahead of print) In: Plant, Cell and Environment.Research output: Contribution to journal › Article › peer-review
Open AccessFile23 Citations (Scopus)205 Downloads (Pure) -
Distinct branches of the N-end rule pathway modulate the plant immune response
Vicente, J., Mendiondo, G. M., Pauwels, J., Pastor, V., Izquierdo, Y., Naumann, C., Movahedi, M., Rooney, D., Gibbs, D. J., Smart, K., Bachmair, A., Gray, J. E., Dissmeyer, N., Castresana, C., Ray, R. V., Gevaert, K. & Holdsworth, M. J., 17 Aug 2018, (E-pub ahead of print) In: New Phytologist.Research output: Contribution to journal › Article › peer-review
Open AccessFile31 Citations (Scopus)187 Downloads (Pure) -
Genetic interactions between ABA signalling and the Arg/N-end rule pathway during Arabidopsis seedling establishment
Zhang, H., Gannon, L., Jones, P. D., Rundle, C. A., Hassall, K. L., Gibbs, D. J., Holdsworth, M. J. & Theodoulou, F. L., 12 Oct 2018, In: Scientific Reports. 8, 1, 12 p., 15192.Research output: Contribution to journal › Article › peer-review
Open AccessFile10 Citations (Scopus)212 Downloads (Pure) -
Oxygen-dependent proteolysis regulates the stability of angiosperm Polycomb Repressive Complex 2 subunit VERNALIZATION2
Gibbs, D., Tedds, H., Labandera Nadeau, A. M., Bailey, M., White, M., Hartman, S., Sprigg, C., Mogg, S., Osborne, R., Dambire, C., Boeckx, T., Paling, Z., Voesenek, L. A. C. J., Flashman, E. & Holdsworth, M., 21 Dec 2018, In: Nature Communications. 9, 1, 5438.Research output: Contribution to journal › Article › peer-review
Open AccessFile32 Citations (Scopus)230 Downloads (Pure) -
2017
N-term 2017: Proteostasis via the N-terminus
Dissmeyer, N., Graciet, E., Holdsworth, M. J. & Gibbs, D. J., 9 Dec 2017, (E-pub ahead of print) In: Trends in Biochemical Sciences.Research output: Contribution to journal › Article
Open Access2 Citations (Scopus) -
N-terminomics reveals control of Arabidopsis seed storage proteins and proteases by the Arg/N-end rule pathway
Zhang, H., Gannon, L., Hassall, K. L., Deery, M. J., Gibbs, D. J., Holdsworth, M. J., van der Hoorn, R. A. L., Lilley, K. S. & Theodoulou, F. L., 23 Nov 2017, (E-pub ahead of print) In: New Phytologist.Research output: Contribution to journal › Article › peer-review
Open Access23 Citations (Scopus) -
2016
An ancient and conserved function for armadillo-related proteins in the control of spore and seed germination by abscisic acid
Moody, L., Saidi, Y., Gibbs, D., Choudhary, A., Holloway, D., Vesty, E., Bansal, K. K., Bradshaw, S. & Coates, J., 11 Jul 2016, In: New Phytologist. 211, 3, p. 940–951Research output: Contribution to journal › Article › peer-review
Open AccessFile9 Citations (Scopus)371 Downloads (Pure) -
From start to finish: amino-terminal protein modifications as degradation signals in plants
Gibbs, D. J., Bailey, M., Tedds, H. M. & Holdsworth, M. J., Sept 2016, In: New Phytologist. 211, 4, p. 1188-1194Research output: Contribution to journal › Article › peer-review
Open AccessFile38 Citations (Scopus)215 Downloads (Pure) -
Learning To Breathe: Developmental Phase Transitions in Oxygen Status
Considine, M. J., Diaz-Vivancos, P., Kerchev, P., Signorelli, S., Agudelo-Romero, P., Gibbs, D. J. & Foyer, C. H., 13 Dec 2016, (E-pub ahead of print) In: Trends in Plant Science.Research output: Contribution to journal › Article › peer-review
Open AccessFile32 Citations (Scopus)195 Downloads (Pure) -
2015
Emerging Functions for N-Terminal Protein Acetylation in Plants
Gibbs, D. J., Oct 2015, In: Trends in Plant Science. 20, 10, p. 599-601 3 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile18 Citations (Scopus)120 Downloads (Pure) -
Enhanced waterlogging tolerance in barley by manipulation of expression of the N-end rule pathway E3 ligase PROTEOLYSIS6
Mendiondo, G. M., Gibbs, D. J., Szurman-Zubrzycka, M., Korn, A., Marquez, J., Szarejko, I., Maluszynski, M., King, J., Axcell, B., Smart, K., Corbineau, F. & Holdsworth, M. J., 6 Feb 2015, In: Plant Biotechnology Journal. 14, 1, p. 40-50Research output: Contribution to journal › Article › peer-review
Open AccessFile69 Citations (Scopus)138 Downloads (Pure) -
Group VII Ethylene Response Factors Coordinate Oxygen and Nitric Oxide Signal Transduction and Stress Responses in Plants
Gibbs, D. J., Conde, J. V., Berckhan, S., Prasad, G., Mendiondo, G. M. & Holdsworth, M. J., Sept 2015, In: Plant Physiology. 169, 1, p. 23-31 9 p.Research output: Contribution to journal › Article › peer-review
91 Citations (Scopus) -
Oxygen Sensing Coordinates Photomorphogenesis to Facilitate Seedling Survival
Abbas, M., Berckhan, S., Rooney, D. J., Gibbs, D. J., Vicente Conde, J., Sousa Correia, C., Bassel, G. W., Marín-de la Rosa, N., León, J., Alabadí, D., Blázquez, M. A. & Holdsworth, M. J., 13 May 2015, In: Current Biology.Research output: Contribution to journal › Article › peer-review
82 Citations (Scopus) -
2014
AtMYB93 is an endodermis-specific transcriptional regulator of lateral root development in arabidopsis
Gibbs, D. J. & Coates, J. C., 2014, In: Plant Signaling & Behavior. 9, 10, p. e970406Research output: Contribution to journal › Article › peer-review
14 Citations (Scopus) -
AtMYB93 is a novel negative regulator of lateral root development in Arabidopsis
Gibbs, D., Voss, U., Harding, S., Fannon, J., Moody, L., Yamada, E., Swarup, K., Nibau, C., Bassel, G., Choudhary, A., Lavenus, J., Bradshaw, S., Stekel, D., Bennett, M. J. & Coates, J., Sept 2014, In: New Phytologist. 203, 4, p. 1194–1207 14 p.Research output: Contribution to journal › Article › peer-review
Open AccessFile38 Citations (Scopus)451 Downloads (Pure) -
Large-scale identification of gibberellin-related transcription factors defines group VII ETHYLENE RESPONSE FACTORS as functional DELLA partners
Marín-de la Rosa, N., Sotillo, B., Miskolczi, P., Gibbs, D. J., Vicente, J., Carbonero, P., Oñate-Sánchez, L., Holdsworth, M. J., Bhalerao, R., Alabadí, D. & Blázquez, M. A., Oct 2014, In: Plant Physiology. 166, 2, p. 1022-32 11 p.Research output: Contribution to journal › Article › peer-review
81 Citations (Scopus) -
Mechanical constraints imposed by 3D cellular geometry and arrangement modulate growth patterns in the Arabidopsis embryo
Bassel, G. W., Stamm, P., Mosca, G., Barbier de Reuille, P., Gibbs, D. J., Winter, R., Janka, A., Holdsworth, M. J. & Smith, R. S., 10 Jun 2014, In: National Academy of Sciences. Proceedings. 111, 23, p. 8685-90 6 p.Research output: Contribution to journal › Article › peer-review
107 Citations (Scopus) -
Nitric oxide sensing in plants is mediated by proteolytic control of group VII ERF transcription factors
Gibbs, D. J., Md Isa, N., Movahedi, M., Lozano-Juste, J., Mendiondo, G. M., Berckhan, S., Marín-de la Rosa, N., Vicente Conde, J., Sousa Correia, C., Pearce, S. P., Bassel, G. W., Hamali, B., Talloji, P., Tomé, D. F. A., Coego, A., Beynon, J., Alabadí, D., Bachmair, A., León, J. & Gray, J. E. & 2 others, , 6 Feb 2014, In: Molecular Cell. 53, 3, p. 369-79 11 p.Research output: Contribution to journal › Article › peer-review
197 Citations (Scopus) -
The eukaryotic N-end rule pathway: conserved mechanisms and diverse functions
Gibbs, D. J., Bacardit, J., Bachmair, A. & Holdsworth, M. J., Oct 2014, In: Trends in Cell Biology. 24, 10, p. 603-11 9 p.Research output: Contribution to journal › Article › peer-review
125 Citations (Scopus) -
2012
Making sense of low oxygen sensing
Bailey-Serres, J., Fukao, T., Gibbs, D. J., Holdsworth, M. J., Lee, S. C., Licausi, F., Perata, P., Voesenek, L. A. C. J. & van Dongen, J. T., Mar 2012, In: Trends in Plant Science. 17, 3, p. 129-138 10 p.Research output: Contribution to journal › Article › peer-review
309 Citations (Scopus) -
2011
From the Cover: Genome-wide network model capturing seed germination reveals coordinated regulation of plant cellular phase transitions
Bassel, G. W., Lan, H., Glaab, E., Gibbs, D. J., Gerjets, T., Krasnogor, N., Bonner, A. J., Holdsworth, M. J. & Provart, N. J., 7 Jun 2011, In: National Academy of Sciences. Proceedings. 108, 23, p. 9709-9714Research output: Contribution to journal › Article › peer-review
157 Citations (Scopus) -
Homeostatic response to hypoxia is regulated by the N-end rule pathway in plants
Gibbs, D. J., Lee, S. C., Isa, N. M., Gramuglia, S., Fukao, T., Bassel, G. W., Correia, C. S., Corbineau, F., Theodoulou, F. L., Bailey-Serres, J. & Holdsworth, M. J., 17 Nov 2011, In: Nature. 479, 7373, p. 415-418 4 p.Research output: Contribution to journal › Article › peer-review
369 Citations (Scopus) -
2010
ARABIDILLO proteins have a novel and conserved domain structure important for the regulation of their stability
Nibau, C., Gibbs, D., Bunting, K., Moody, L., Smiles, E., Tubby, J., Bradshaw, S. & Coates, J., 4 Nov 2010, In: Plant Molecular Biology. 75, 1-2, p. 77-92Research output: Contribution to journal › Article › peer-review
10 Citations (Scopus)1 Downloads (Pure) -
2008
Branching out in new directions:the control of root architecture by lateral root formation
Nibau, C., Gibbs, D. J. & Coates, J. C., 2008, In: New Phytologist. 179, 3, p. 595-614 20 p.Research output: Contribution to journal › Review article › peer-review
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Branching out in new directions: the control of root architecture by lateral root formation
Nibau, C., Gibbs, D. & Coates, J., 1 Aug 2008, In: New Phytologist. 179, 3, p. 595-614 20 p.Research output: Contribution to journal › Review article › peer-review
202 Citations (Scopus)